SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04295

Signal sequence   MLGLHVGTLISLFLCILLEPVEG

Length  23

Organism  Oncorhynchus keta (Chum salmon) (Salmo keta)

UniProt ID  P10256,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04295.cif

Structure  SPKB04295.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2468.05084

Aliphatic index  177.826087

Isoelectric point  4.254230468

Charge (pH=7)   -1.96953108

Topological polar surface area  838.47

Aromaticity  0.043478261

Average rotatable bonds  3.47826087

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  31

X logP energy  -1.8147

Hydropathy 



Literature Information


Title  The complete amino acid sequences of beta-subunits of two distinct chum salmon GTHs.

DOI  10.1016/0016-6480(88)90273-0,

Publication Year  1988

PubMed ID  3192067,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.