SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04292

Signal sequence   MTHSWLLLTVLGCSAAMA

Length  18

Organism  Pseudomonas fluorescens

UniProt ID  P0DXF4,

Motif  1..18



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04292.cif

Structure  SPKB04292.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1905.31864

Aliphatic index  119.4444444

Isoelectric point  7.35902981

Charge (pH=7)   0.026918674

Topological polar surface area  683.41

Aromaticity  0.055555556

Average rotatable bonds  3.277777778

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  27

X logP energy  -4.9566

Hydropathy 



Literature Information


Title  A new class of hybrid secretion system is employed in Pseudomonas amyloid biogenesis.

DOI  10.1038/s41467-017-00361-6,

Publication Year  2017

PubMed ID  28811582,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.