SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04285

Signal sequence   MRTLWIMAVLLLGVDG

Length  16

Organism  Protobothrops flavoviridis (Habu) (Trimeresurus flavoviridis)

UniProt ID  P0DJJ8,

Motif  1..16



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04285.cif

Structure  SPKB04285.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1788.23964

Aliphatic index  164.375

Isoelectric point  6.338718596

Charge (pH=7)   -0.001572528

Topological polar surface area  635.04

Aromaticity  0.0625

Average rotatable bonds  3.625

Number of hydrogen bond donors  23

Number of hydrogen bond acceptors  22

X logP energy  -1.15553

Hydropathy 



Literature Information


Title  Purification and amino acid sequence of basic protein I, a lysine-49-phospholipase A2 with low activity, from the venom of Trimeresurus flavoviridis (Habu snake).

DOI  10.1016/0041-0101(90)90005-r,

Publication Year  1990

PubMed ID  2330604,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.