SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04256

Signal sequence   MTFPFSGAAVKRMLVTGVVLPFGLLVAAGQAQA

Length  33

Organism  Pseudomonas putida (Arthrobacter siderocapsulatus)

UniProt ID  P09787,

Motif  1..33



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04256.cif

Structure  SPKB04256.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3349.05604

Aliphatic index  109.3939394

Isoelectric point  11.65177567

Charge (pH=7)   1.997685954

Topological polar surface area  1211.73

Aromaticity  0.090909091

Average rotatable bonds  3.181818182

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  43

X logP energy  -9.05483

Hydropathy 



Literature Information


Title  Amino acid and sequence analysis of the cytochrome and flavoprotein subunits of p-cresol methylhydroxylase.

DOI  10.1021/bi00368a021,

Publication Year  1986

PubMed ID  3790500,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.