SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04254

Signal sequence   MARRSQGTKLHLAVLCLVVSCHA

Length  23

Organism  Oncorhynchus keta (Chum salmon) (Salmo keta)

UniProt ID  P09584,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04254.cif

Structure  SPKB04254.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2494.03264

Aliphatic index  118.6956522

Isoelectric point  9.916052855

Charge (pH=7)   3.055551393

Topological polar surface area  1014.48

Aromaticity  0

Average rotatable bonds  3.608695652

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  36

X logP energy  -10.26186

Hydropathy 



Literature Information


Title  Primary structure of chum salmon prolactins: occurrence of highly conserved regions.

DOI  10.1016/0003-9861(86)90621-1,

Publication Year  1986

PubMed ID  3947078,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.