SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04198

Signal sequence   MRLCICFVLLAVIVCASA

Length  18

Organism  Anas platyrhynchos (Mallard) (Anas boschas)

UniProt ID  P02740,

Motif  1..18



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04198.cif

Structure  SPKB04198.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1925.49774

Aliphatic index  173.3333333

Isoelectric point  8.04679067

Charge (pH=7)   0.81205684

Topological polar surface area  640.15

Aromaticity  0.055555556

Average rotatable bonds  3.388888889

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  25

X logP energy  -2.06113

Hydropathy 



Literature Information


Title  Primary structure of duck amyloid protein A. The form deposited in tissues may be identical to its serum precursor.

DOI  10.1016/0014-5793(87)81008-6,

Publication Year  1987

PubMed ID  3109944,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.