SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04128

Signal sequence   MKPYALLSLLATGTLLAQGAWA

Length  22

Organism  Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

UniProt ID  P00099,

Motif  1..22



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04128.cif

Structure  SPKB04128.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2289.76114

Aliphatic index  129.0909091

Isoelectric point  9.298300651

Charge (pH=7)   0.996838851

Topological polar surface area  831.45

Aromaticity  0.090909091

Average rotatable bonds  3.227272727

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  30

X logP energy  -4.702

Hydropathy 



Literature Information


Title  THE AMINO ACID SEQUENCE OF PSEUDOMONAS CYTOCHROME C-551.

DOI  10.1042/bj0890349,

Publication Year  1963

PubMed ID  14084622,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.