SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04091

Signal sequence   MALLGRLLPLALALALGPAATHA

Length  23

Organism  Sus scrofa (Pig)

UniProt ID  O11780,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04091.cif

Structure  SPKB04091.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2254.80554

Aliphatic index  166.0869565

Isoelectric point  10.5517587

Charge (pH=7)   1.088890079

Topological polar surface area  796.75

Aromaticity  0

Average rotatable bonds  3

Number of hydrogen bond donors  27

Number of hydrogen bond acceptors  28

X logP energy  -3.78983

Hydropathy 



Literature Information


Title  Characterization of a cartilage-derived 66-kDa protein (RGD-CAP/beta ig-h3) that binds to collagen.

DOI  10.1016/s0167-4889(96)00147-4,

Publication Year  1997

PubMed ID  9061001,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.