SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04065

Signal sequence   MKLFIILATATLLIAATQAKYL

Length  22

Organism  Fagopyrum tataricum (Tartarian buckwheat) (Polygonum tataricum)

UniProt ID  E9NX73,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04065.cif

Structure  SPKB04065.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2408.02384

Aliphatic index  164.5454545

Isoelectric point  10.24760792

Charge (pH=7)   1.996543817

Topological polar surface area  850.47

Aromaticity  0.090909091

Average rotatable bonds  3.636363636

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  31

X logP energy  -2.3426

Hydropathy 



Literature Information


Title  Molecular cloning and characterization of Fag t 2: a 16-kDa major allergen from Tartary buckwheat seeds.

DOI  10.1111/j.1398-9995.2011.02657.x,

Publication Year  2011

PubMed ID  21645012,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.