SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04060

Signal sequence   MKAYKLLTTASIGALMLGMSTAAYS

Length  25

Organism  Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)

UniProt ID  E1VBK1,

Motif  1..25



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  3GYY,

Predicted Structure ID  SPKB04060.cif

Structure  SPKB04060.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2594.13794

Aliphatic index  98

Isoelectric point  9.930129002

Charge (pH=7)   1.995693403

Topological polar surface area  975.6

Aromaticity  0.08

Average rotatable bonds  3.44

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  39

X logP energy  -8.8405

Hydropathy 



Literature Information


Title  The substrate-binding protein TeaA of the osmoregulated ectoine transporter TeaABC from Halomonas elongata: purification and characterization of recombinant TeaA.

DOI  10.1111/j.1574-6968.2002.tb11227.x,

Publication Year  2002

PubMed ID  12076815,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.