SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04018

Signal sequence   MNTIEKFENIKLFSLKKIIGG

Length  21

Organism  Streptococcus uberis

UniProt ID  A9Q0M7,

Motif  1..21



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04018.cif

Structure  SPKB04018.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2423.93954

Aliphatic index  111.4285714

Isoelectric point  10.33332311

Charge (pH=7)   2.000354409

Topological polar surface area  950.64

Aromaticity  0.095238095

Average rotatable bonds  4.19047619

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  33

X logP energy  -5.7583

Hydropathy 



Literature Information


Title  Ubericin A, a class IIa bacteriocin produced by Streptococcus uberis.

DOI  10.1128/AEM.01818-07,

Publication Year  2007

PubMed ID  17933926,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.