SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03996

Signal sequence   MLRSLPASLALVAAFASKASA

Length  21

Organism  Trametes coccinea (strain BRFM310) (Pycnoporus coccineus)

UniProt ID  A0A2I6QAZ5,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03996.cif

Structure  SPKB03996.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2075.49734

Aliphatic index  121.4285714

Isoelectric point  11.65177567

Charge (pH=7)   1.997685954

Topological polar surface area  805.37

Aromaticity  0.047619048

Average rotatable bonds  3.142857143

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  29

X logP energy  -8.06253

Hydropathy 



Literature Information


Title  Lytic xylan oxidases from wood-decay fungi unlock biomass degradation.

DOI  10.1038/nchembio.2558,

Publication Year  2018

PubMed ID  29377002,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.