SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03983

Signal sequence   MFPRVVRLNSRLVSFALLGLQIANG

Length  25

Organism  Agaricus xanthodermus (Poison yellow meadow mushroom)

UniProt ID  V5NC32,

Motif  1..25



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03983.cif

Structure  SPKB03983.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2772.35054

Aliphatic index  136.4

Isoelectric point  12.801071

Charge (pH=7)   2.997974365

Topological polar surface area  1108.36

Aromaticity  0.08

Average rotatable bonds  3.64

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  35

X logP energy  -8.88389

Hydropathy 



Literature Information


Title  Properties of pyranose dehydrogenase purified from the litter-degrading fungus Agaricus xanthoderma.

DOI  10.1111/j.1742-4658.2007.05634.x,

Publication Year  2007

PubMed ID  17227387,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.