SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03979

Signal sequence   MEVSVLMWVLLFYSLLGFQVTTA

Length  23

Organism  Pinus contorta (Shore pine) (Lodgepole pine)

UniProt ID  Q9ZT64,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03979.cif

Structure  SPKB03979.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2648.21374

Aliphatic index  139.5652174

Isoelectric point  3.849982713

Charge (pH=7)   -1.001090992

Topological polar surface area  900.85

Aromaticity  0.173913043

Average rotatable bonds  3.608695652

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  33

X logP energy  -1.8899

Hydropathy 



Literature Information


Title  A beta-glucosidase from lodgepole pine xylem specific for the lignin precursor coniferin.

DOI  10.1104/pp.107.2.331,

Publication Year  1995

PubMed ID  7724669,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.