SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03913

Signal sequence   MTKFKLLLAGSLVAIVSMGLLA

Length  22

Organism  Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / CCUG 13145 / JCM 31913 / LMG 7466 / NCTC 11488 / FDC 602W) (Vibrio succinogenes)

UniProt ID  Q9S1E5,

Motif  1..22



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  1FS9,

Predicted Structure ID  SPKB03913.cif

Structure  SPKB03913.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2276.90794

Aliphatic index  164.0909091

Isoelectric point  10.80537956

Charge (pH=7)   1.997394232

Topological polar surface area  787.15

Aromaticity  0.045454545

Average rotatable bonds  3.545454545

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  30

X logP energy  -3.0914

Hydropathy 



Literature Information


Title  A NapC/NirT-type cytochrome c (NrfH) is the mediator between the quinone pool and the cytochrome c nitrite reductase of Wolinella succinogenes.

DOI  10.1046/j.1365-2958.2000.01742.x,

Publication Year  2000

PubMed ID  10672190,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.