SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03911

Signal sequence   MVSAQLHFLCLLTLYLTCGYGEEGK

Length  25

Organism  Mus musculus (Mouse)

UniProt ID  Q9R100,

Motif  1..25



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03911.cif

Structure  SPKB03911.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2790.30284

Aliphatic index  109.2

Isoelectric point  5.487974519

Charge (pH=7)   -1.033501658

Topological polar surface area  1035.26

Aromaticity  0.12

Average rotatable bonds  3.64

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  39

X logP energy  -6.524

Hydropathy 



Literature Information


Title  The identification of a nonclassical cadherin expressed during B cell development and its interaction with surrogate light chain.

DOI  10.1074/jbc.M005901200,

Publication Year  2000

PubMed ID  10906147,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.