SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03838

Signal sequence   MRSLAVVVAVVATVAMAIGTAHG

Length  23

Organism  Secale cereale (Rye)

UniProt ID  Q9FRV0,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03838.cif

Structure  SPKB03838.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2224.70844

Aliphatic index  135.6521739

Isoelectric point  10.5517587

Charge (pH=7)   1.088890079

Topological polar surface area  854.79

Aromaticity  0

Average rotatable bonds  3.043478261

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  31

X logP energy  -8.03653

Hydropathy 



Literature Information


Title  Molecular cloning, functional expression, and mutagenesis of cDNA encoding rye (Secale cereale) seed chitinase-c.

DOI  10.1271/bbb.66.277,

Publication Year  2002

PubMed ID  11999399,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.