SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03807

Signal sequence   MRFFCARCCSFGPEMPAVQLLLLACLVWDVGA

Length  32

Organism  Homo sapiens (Human)

UniProt ID  Q99972,

Motif  1..32



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03807.cif

Structure  SPKB03807.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3548.33384

Aliphatic index  100.625

Isoelectric point  6.103521343

Charge (pH=7)   -0.24769958

Topological polar surface area  1225.35

Aromaticity  0.125

Average rotatable bonds  3.40625

Number of hydrogen bond donors  46

Number of hydrogen bond acceptors  45

X logP energy  -6.21826

Hydropathy 



Literature Information


Title  Dual localization of wild-type myocilin in the endoplasmic reticulum and extracellular compartment likely occurs due to its incomplete secretion.

DOI  NA,

Publication Year  2009

PubMed ID  19287508,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.