SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03798

Signal sequence   MAGLTAAVPQPGVLLILLLNLLHPAQP

Length  27

Organism  Rattus norvegicus (Rat)

UniProt ID  Q99372,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03798.cif

Structure  SPKB03798.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2761.40484

Aliphatic index  166.2962963

Isoelectric point  7.550323994

Charge (pH=7)   0.08889339

Topological polar surface area  962.94

Aromaticity  0

Average rotatable bonds  3.074074074

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  34

X logP energy  -4.3967

Hydropathy 



Literature Information


Title  Peptidomics for Studying Limited Proteolysis.

DOI  10.1021/acs.jproteome.5b00820,

Publication Year  2015

PubMed ID  26479776,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.