SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03788

Signal sequence   MGAARSPPSAVPGPLLGLLLLLLGVLAPGGAS

Length  32

Organism  Homo sapiens (Human)

UniProt ID  Q96F46,

Motif  1..32



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03788.cif

Structure  SPKB03788.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2966.61864

Aliphatic index  143.4375

Isoelectric point  10.55000222

Charge (pH=7)   0.997980988

Topological polar surface area  1044.06

Aromaticity  0

Average rotatable bonds  2.75

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  38

X logP energy  -8.43383

Hydropathy 



Literature Information


Title  Signal peptide prediction based on analysis of experimentally verified cleavage sites.

DOI  10.1110/ps.04682504,

Publication Year  2004

PubMed ID  15340161,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.