SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03768

Signal sequence   MNHLVIISVFLSSVLLLYRGESGITSSFIR

Length  30

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q949Y3,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03768.cif

Structure  SPKB03768.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3352.98294

Aliphatic index  146

Isoelectric point  9.350005121

Charge (pH=7)   1.089811476

Topological polar surface area  1301.93

Aromaticity  0.1

Average rotatable bonds  3.7

Number of hydrogen bond donors  48

Number of hydrogen bond acceptors  45

X logP energy  -10.14286

Hydropathy 



Literature Information


Title  Biochemical and molecular characterization of AtPAP26, a vacuolar purple acid phosphatase up-regulated in phosphate-deprived Arabidopsis suspension cells and seedlings.

DOI  10.1104/pp.106.087171,

Publication Year  2006

PubMed ID  16963519,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.