SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03741

Signal sequence   MAFTRRSFMKGLGATGGAGLAYGAMSTLGLAPSTAAPARTFQPLA

Length  45

Organism  Rhodococcus opacus (Nocardia opaca)

UniProt ID  Q8VPD4,

Motif  1..45



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Cytoplasm

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03741.cif

Structure  SPKB03741.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4475.22464

Aliphatic index  65.55555556

Isoelectric point  12.22713629

Charge (pH=7)   3.996828917

Topological polar surface area  1754.23

Aromaticity  0.088888889

Average rotatable bonds  3.111111111

Number of hydrogen bond donors  63

Number of hydrogen bond acceptors  63

X logP energy  -20.90169

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.