SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03727

Signal sequence   MKKTIQRGLFTGALVLLTAMTSKPAHAA

Length  28

Organism  Chlorobaculum thiosulfatiphilum (Chlorobium limicola f.sp. thiosulfatophilum)

UniProt ID  Q8RLX0,

Motif  1..28



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03727.cif

Structure  SPKB03727.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2956.60134

Aliphatic index  97.85714286

Isoelectric point  11.9245139

Charge (pH=7)   4.088004977

Topological polar surface area  1153.11

Aromaticity  0.035714286

Average rotatable bonds  3.535714286

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  42

X logP energy  -10.61113

Hydropathy 



Literature Information


Title  The primary structure of soluble cytochrome c-551 from the phototrophic green sulfur bacterium Chlorobium limicola, strain Tassajara, reveals a novel c-type cytochrome.

DOI  10.1021/bi9806706,

Publication Year  1998

PubMed ID  9692944,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.