SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03697

Signal sequence   MGEINRRNFLKVSILGAAAAAVASASAVKGMVSPLVADA

Length  39

Organism  Desulfitobacterium hafniense (strain Y51)

UniProt ID  Q8L172,

Motif  1..39



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Cytoplasm

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03697.cif

Structure  SPKB03697.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3857.54514

Aliphatic index  112.8205128

Isoelectric point  10.77374885

Charge (pH=7)   1.999609216

Topological polar surface area  1577.87

Aromaticity  0.025641026

Average rotatable bonds  3.282051282

Number of hydrogen bond donors  55

Number of hydrogen bond acceptors  54

X logP energy  -17.47646

Hydropathy 



Literature Information


Title  Molecular characterization of the PceA reductive dehalogenase of desulfitobacterium sp. strain Y51.

DOI  10.1128/JB.184.13.3419-3425.2002,

Publication Year  2002

PubMed ID  12057934,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.