SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03689

Signal sequence   METVSVEEGLD

Length  11

Organism  Ruditapes philippinarum (Japanese carpet shell) (Venerupis philippinarum)

UniProt ID  Q8IU26,

Motif  1..11



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03689.cif

Structure  SPKB03689.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1208.30274

Aliphatic index  88.18181818

Isoelectric point  3.331705123

Charge (pH=7)   -3.996243848

Topological polar surface area  543.98

Aromaticity  0

Average rotatable bonds  3.727272727

Number of hydrogen bond donors  18

Number of hydrogen bond acceptors  19

X logP energy  -5.5689

Hydropathy 



Literature Information


Title  A small chimerically bifunctional monomeric protein: Tapes japonica lysozyme.

DOI  10.1007/s00018-003-3082-z,

Publication Year  2003

PubMed ID  14523554,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.