SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03682

Signal sequence   MKKPLRTSLLMLCLATPLAALA

Length  22

Organism  Pseudomonas putida (Arthrobacter siderocapsulatus)

UniProt ID  Q8GR64,

Motif  1..22



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03682.cif

Structure  SPKB03682.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2356.02774

Aliphatic index  142.2727273

Isoelectric point  10.79319833

Charge (pH=7)   2.935416204

Topological polar surface area  831.47

Aromaticity  0

Average rotatable bonds  3.5

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  32

X logP energy  -4.29503

Hydropathy 



Literature Information


Title  Structure at 1.9 A resolution of a quinohemoprotein alcohol dehydrogenase from Pseudomonas putida HK5.

DOI  10.1016/s0969-2126(02)00774-8,

Publication Year  2002

PubMed ID  12057198,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.