SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03660

Signal sequence   MNKLFSLILALFLVNSAVVSS

Length  21

Organism  Dictyostelium discoideum (Social amoeba)

UniProt ID  Q86IV5,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03660.cif

Structure  SPKB03660.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2266.76734

Aliphatic index  162.3809524

Isoelectric point  9.700002532

Charge (pH=7)   0.997689266

Topological polar surface area  838.44

Aromaticity  0.095238095

Average rotatable bonds  3.571428571

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  30

X logP energy  -5.5338

Hydropathy 



Literature Information


Title  A cell-counting factor regulating structure size in Dictyostelium.

DOI  10.1101/gad.13.15.1960,

Publication Year  1999

PubMed ID  10444594,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.