SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03632

Signal sequence   MAKHLALSVAAAVAVSWLAASSAAA

Length  25

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q76BW5,

Motif  1..25



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03632.cif

Structure  SPKB03632.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2367.79184

Aliphatic index  125.6

Isoelectric point  9.702001779

Charge (pH=7)   1.088598356

Topological polar surface area  913.13

Aromaticity  0.04

Average rotatable bonds  2.92

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  33

X logP energy  -9.1002

Hydropathy 



Literature Information


Title  Proteomic analysis of rice leaf, stem and root tissues during growth course.

DOI  10.1002/pmic.200600043,

Publication Year  2006

PubMed ID  16758443,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.