SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03628

Signal sequence   MKTTRRSFLKLVGVSVVGLSLGQLGFDLEDAQA

Length  33

Organism  Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough) (Desulfovibrio vulgaris)

UniProt ID  Q727P3,

Motif  1..33



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03628.cif

Structure  SPKB03628.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3537.13514

Aliphatic index  112.1212121

Isoelectric point  9.532416112

Charge (pH=7)   1.0000557

Topological polar surface area  1469.59

Aromaticity  0.060606061

Average rotatable bonds  3.696969697

Number of hydrogen bond donors  52

Number of hydrogen bond acceptors  49

X logP energy  -14.51536

Hydropathy 



Literature Information


Title  Tungsten and molybdenum regulation of formate dehydrogenase expression in Desulfovibrio vulgaris Hildenborough.

DOI  10.1128/JB.00042-11,

Publication Year  2011

PubMed ID  21498650,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.