SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03623

Signal sequence   MAVSSTPWALVALFLMASSTVMA

Length  23

Organism  Brassica oleracea var. botrytis (Cauliflower)

UniProt ID  Q6YDN9,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03623.cif

Structure  SPKB03623.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2384.89254

Aliphatic index  110.4347826

Isoelectric point  6.099999998

Charge (pH=7)   -0.002015701

Topological polar surface area  831.9

Aromaticity  0.086956522

Average rotatable bonds  3.130434783

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  33

X logP energy  -6.2673

Hydropathy 



Literature Information


Title  N-linked glycosylation of native and recombinant cauliflower xyloglucan endotransglycosylase 16A.

DOI  10.1042/BJ20030485,

Publication Year  2003

PubMed ID  12826015,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.