SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03589

Signal sequence   MRKITSILLTCVMGCTATYA

Length  20

Organism  Microbulbifer thermotolerans

UniProt ID  Q6F4N4,

Motif  1..20



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03589.cif

Structure  SPKB03589.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2176.69394

Aliphatic index  102.5

Isoelectric point  8.798094803

Charge (pH=7)   1.872886108

Topological polar surface area  825.52

Aromaticity  0.05

Average rotatable bonds  3.55

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  33

X logP energy  -7.65703

Hydropathy 



Literature Information


Title  Cloning, expression, and characterization of a glycoside hydrolase family 86 beta-agarase from a deep-sea Microbulbifer-like isolate.

DOI  10.1007/s00253-004-1757-5,

Publication Year  2004

PubMed ID  15490156,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.