SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03584

Signal sequence   MHFSTLFGAAATAALAGSTNASPLAR

Length  26

Organism  Colletotrichum lindemuthianum (Bean anthracnose fungus) (Glomerella lindemuthiana)

UniProt ID  Q6DWK3,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  2IW0,

Predicted Structure ID  SPKB03584.cif

Structure  SPKB03584.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2534.87244

Aliphatic index  75.76923077

Isoelectric point  10.5517587

Charge (pH=7)   1.088890079

Topological polar surface area  1037.08

Aromaticity  0.076923077

Average rotatable bonds  2.961538462

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  37

X logP energy  -13.95293

Hydropathy 



Literature Information


Title  Cloning and expression of chitin deacetylase gene from a Deuteromycete, Colletotrichum lindemuthianum.

DOI  10.1016/s1389-1723(99)80088-7,

Publication Year  1999

PubMed ID  16232493,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.