SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03552

Signal sequence   MGRLLLWVGLVLLMKPNDGTA

Length  21

Organism  Mesocricetus auratus (Golden hamster)

UniProt ID  Q60557,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03552.cif

Structure  SPKB03552.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2297.84554

Aliphatic index  143.8095238

Isoelectric point  9.695024739

Charge (pH=7)   0.998132438

Topological polar surface area  840.86

Aromaticity  0.047619048

Average rotatable bonds  3.571428571

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  29

X logP energy  -3.54343

Hydropathy 



Literature Information


Title  Biochemical characterization of hamster oviductin as a sulphated zona pellucida-binding glycoprotein.

DOI  10.1042/bj2950437,

Publication Year  1993

PubMed ID  8240241,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.