SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03522

Signal sequence   MRQTGLASLPLKSLAVAVLLSLAGTPALA

Length  29

Organism  Pseudomonas putida (Arthrobacter siderocapsulatus)

UniProt ID  Q4W6G0,

Motif  1..29



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03522.cif

Structure  SPKB03522.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2863.49534

Aliphatic index  148.2758621

Isoelectric point  11.65177567

Charge (pH=7)   1.997685954

Topological polar surface area  1092.7

Aromaticity  0

Average rotatable bonds  3.172413793

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  39

X logP energy  -9.80253

Hydropathy 



Literature Information


Title  Molecular cloning and structural analysis of quinohemoprotein alcohol dehydrogenase ADH-IIG from Pseudomonas putida HK5.

DOI  10.1016/j.jmb.2005.06.078,

Publication Year  2005

PubMed ID  16061256,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.