SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03440

Signal sequence   MEALPLLAATTPDHGRHRRLLLLPLLLFLLPAGAVQG

Length  37

Organism  Homo sapiens (Human)

UniProt ID  Q13162,

Motif  1..37



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  8EKW,

Predicted Structure ID  SPKB03440.cif

Structure  SPKB03440.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3985.83604

Aliphatic index  147.8378378

Isoelectric point  10.31217267

Charge (pH=7)   1.182014154

Topological polar surface area  1476.97

Aromaticity  0.027027027

Average rotatable bonds  3.378378378

Number of hydrogen bond donors  50

Number of hydrogen bond acceptors  49

X logP energy  -7.83739

Hydropathy 



Literature Information


Title  Global profiling of protease cleavage sites by chemoselective labeling of protein N-termini.

DOI  10.1073/pnas.0908958106,

Publication Year  2009

PubMed ID  19892738,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.