SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03425

Signal sequence   MKKTVTAVALLCALSSTAIAPTFA

Length  24

Organism  Hydrogenophilus thermoluteolus (Pseudomonas hydrogenothermophila)

UniProt ID  Q08IS0,

Motif  1..24



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03425.cif

Structure  SPKB03425.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2408.94054

Aliphatic index  114.1666667

Isoelectric point  9.676237541

Charge (pH=7)   1.935419516

Topological polar surface area  897.25

Aromaticity  0.041666667

Average rotatable bonds  3.166666667

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  35

X logP energy  -8.6379

Hydropathy 



Literature Information


Title  Thiosulfate oxidation by a moderately thermophilic hydrogen-oxidizing bacterium, Hydrogenophilus thermoluteolus.

DOI  10.1007/s00203-007-0244-7,

Publication Year  2007

PubMed ID  17516047,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.