SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03411

Signal sequence   MRIQLNTIDLQCIIALSCLGQFVHAEANREDLKQIDFQFPVLER

Length  44

Organism  Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

UniProt ID  Q06703,

Motif  1..44



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03411.cif

Structure  SPKB03411.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5130.97324

Aliphatic index  117.5

Isoelectric point  4.734018098

Charge (pH=7)   -2.028696189

Topological polar surface area  2112.12

Aromaticity  0.068181818

Average rotatable bonds  3.977272727

Number of hydrogen bond donors  72

Number of hydrogen bond acceptors  68

X logP energy  -17.04359

Hydropathy 



Literature Information


Title  Expression, purification, and characterization of a cobalt-activated chitin deacetylase (Cda2p) from Saccharomyces cerevisiae.

DOI  10.1006/prep.2001.1547,

Publication Year  2002

PubMed ID  11812231,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.