SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03397

Signal sequence   MNMSLSRIVKAAPLRRTTLAMALGALGALGAAPAAHA

Length  37

Organism  Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) (Alcaligenes bronchisepticus)

UniProt ID  Q03035,

Motif  1..37



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03397.cif

Structure  SPKB03397.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3674.44544

Aliphatic index  111.3513514

Isoelectric point  12.80742811

Charge (pH=7)   4.088588423

Topological polar surface area  1457.75

Aromaticity  0

Average rotatable bonds  3.216216216

Number of hydrogen bond donors  52

Number of hydrogen bond acceptors  51

X logP energy  -15.27919

Hydropathy 



Literature Information


Title  Cloning, nucleotide sequence and heterologous expression of the protective outer-membrane protein P.68 pertactin from Bordetella bronchiseptica.

DOI  10.1099/00221287-138-8-1697,

Publication Year  1992

PubMed ID  1527510,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.