SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03370

Signal sequence   MRLHRAKVSKSVFTLSTLTASCLMAFNSYA

Length  30

Organism  Vibrio furnissii

UniProt ID  P96156,

Motif  1..30



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03370.cif

Structure  SPKB03370.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3334.96084

Aliphatic index  84.66666667

Isoelectric point  10.88843615

Charge (pH=7)   4.02547157

Topological polar surface area  1336.9

Aromaticity  0.1

Average rotatable bonds  3.666666667

Number of hydrogen bond donors  51

Number of hydrogen bond acceptors  49

X logP energy  -14.36716

Hydropathy 



Literature Information


Title  The chitin catabolic cascade in the marine bacterium Vibrio furnissii. Molecular cloning, isolation, and characterization of a periplasmic chitodextrinase.

DOI  10.1074/jbc.271.52.33414,

Publication Year  1996

PubMed ID  8969204,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.