SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03356

Signal sequence   MSRAPTLAAAAAVAAVVLICSSSTATAADGN

Length  31

Organism  Sorghum bicolor (Sorghum) (Sorghum vulgare)

UniProt ID  P84516,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03356.cif

Structure  SPKB03356.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2862.26604

Aliphatic index  101.2903226

Isoelectric point  6.161167719

Charge (pH=7)   -0.063547244

Topological polar surface area  1211.43

Aromaticity  0

Average rotatable bonds  2.838709677

Number of hydrogen bond donors  44

Number of hydrogen bond acceptors  44

X logP energy  -18.18703

Hydropathy 



Literature Information


Title  Biochemical characterization of the major sorghum grain peroxidase.

DOI  10.1111/j.1742-4658.2006.05243.x,

Publication Year  2006

PubMed ID  16650004,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.