SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03355

Signal sequence   MGRTTSSPKAMMRIATVAAILTILASTCMA

Length  30

Organism  Allium sativum (Garlic)

UniProt ID  P83886,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03355.cif

Structure  SPKB03355.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3098.80464

Aliphatic index  94.66666667

Isoelectric point  11.48119255

Charge (pH=7)   2.935707927

Topological polar surface area  1210.09

Aromaticity  0

Average rotatable bonds  3.4

Number of hydrogen bond donors  46

Number of hydrogen bond acceptors  47

X logP energy  -13.92036

Hydropathy 



Literature Information


Title  Isolation, characterization and molecular cloning of the mannose-binding lectins from leaves and roots of garlic (Allium sativum L.).

DOI  10.1023/a:1005717020021,

Publication Year  1997

PubMed ID  9037141,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.