SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03352

Signal sequence   MNGLILFCAVVFATAVCTYG

Length  20

Organism  Crassostrea virginica (Eastern oyster)

UniProt ID  P83673,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03352.cif

Structure  SPKB03352.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2093.54484

Aliphatic index  117

Isoelectric point  5.824052577

Charge (pH=7)   -0.126815547

Topological polar surface area  720

Aromaticity  0.15

Average rotatable bonds  3.15

Number of hydrogen bond donors  27

Number of hydrogen bond acceptors  28

X logP energy  -4.2783

Hydropathy 



Literature Information


Title  Purification and characterization of lysozyme from plasma of the eastern oyster (Crassostrea virginica).

DOI  10.1016/j.cbpc.2004.05.011,

Publication Year  2004

PubMed ID  15364284,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.