SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03195

Signal sequence   MIRKCLVLFLSFALLLSVFPMLNVDA

Length  26

Organism  Paenibacillus polymyxa (Bacillus polymyxa)

UniProt ID  P45796,

Motif  1..26



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03195.cif

Structure  SPKB03195.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2954.72674

Aliphatic index  161.1538462

Isoelectric point  8.545113874

Charge (pH=7)   0.936157722

Topological polar surface area  990.8

Aromaticity  0.115384615

Average rotatable bonds  3.692307692

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  36

X logP energy  -1.70783

Hydropathy 



Literature Information


Title  Purification and characterization of an arabinofuranosidase from Bacillus polymyxa expressed in Bacillus subtilis.

DOI  10.1007/BF00164489,

Publication Year  1995

PubMed ID  8579824,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.