SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03118

Signal sequence   MKAIVFVLIFAVAFAVTATHQ

Length  21

Organism  Entamoeba histolytica (strain ATCC 30459 / HM-1:IMSS / ABRM)

UniProt ID  P34095,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03118.cif

Structure  SPKB03118.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2277.79634

Aliphatic index  134.7619048

Isoelectric point  9.702001779

Charge (pH=7)   1.088598356

Topological polar surface area  783.57

Aromaticity  0.142857143

Average rotatable bonds  3.380952381

Number of hydrogen bond donors  27

Number of hydrogen bond acceptors  28

X logP energy  -2.4408

Hydropathy 



Literature Information


Title  Primary and secondary structure of the pore-forming peptide of pathogenic Entamoeba histolytica.

DOI  10.1002/j.1460-2075.1992.tb05432.x,

Publication Year  1992

PubMed ID  1396552,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.