SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03093

Signal sequence   MVVGTSCQPQHGLYLLLLLLALPLRSQA

Length  28

Organism  Rattus norvegicus (Rat)

UniProt ID  P31722,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03093.cif

Structure  SPKB03093.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3035.69944

Aliphatic index  153.2142857

Isoelectric point  8.534796248

Charge (pH=7)   1.026064949

Topological polar surface area  1132.21

Aromaticity  0.035714286

Average rotatable bonds  3.464285714

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  40

X logP energy  -7.44803

Hydropathy 



Literature Information


Title  Rapid isolation and biochemical characterization of rat C1 and C1q.

DOI  10.1016/0161-5890(93)90111-n,

Publication Year  1993

PubMed ID  8464426,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.