SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03073

Signal sequence   MAKFASIIVLLFVALVVFAAFEEPTMVEA

Length  29

Organism  Raphanus sativus (Radish) (Raphanus raphanistrum var. sativus)

UniProt ID  P30230,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03073.cif

Structure  SPKB03073.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3157.86024

Aliphatic index  137.9310345

Isoelectric point  3.980054623

Charge (pH=7)   -1.996985366

Topological polar surface area  1047.71

Aromaticity  0.137931034

Average rotatable bonds  3.448275862

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  38

X logP energy  -1.3177

Hydropathy 



Literature Information


Title  Analysis of two novel classes of plant antifungal proteins from radish (Raphanus sativus L.) seeds.

DOI  NA,

Publication Year  1992

PubMed ID  1639777,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.