SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB03035

Signal sequence   MSVSKIAFVLSAIASLAVA

Length  19

Organism  Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

UniProt ID  P27654,

Motif  1..19



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB03035.cif

Structure  SPKB03035.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1878.30074

Aliphatic index  154.2105263

Isoelectric point  9.700002532

Charge (pH=7)   0.997689266

Topological polar surface area  694.06

Aromaticity  0.052631579

Average rotatable bonds  3.210526316

Number of hydrogen bond donors  25

Number of hydrogen bond acceptors  26

X logP energy  -5.5294

Hydropathy 



Literature Information


Title  Structure of the glucan-binding sugar chain of Tip1p, a cell wall protein of Saccharomyces cerevisiae.

DOI  10.1016/s0304-4165(99)00012-4,

Publication Year  1999

PubMed ID  10216230,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.