SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02997

Signal sequence   MTNITKRSLVAAGVLAALMAGNVALA

Length  26

Organism  Escherichia coli (strain K12)

UniProt ID  P23843,

Motif  1..26



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  9A37,

Predicted Structure ID  SPKB02997.cif

Structure  SPKB02997.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2557.10824

Aliphatic index  135.3846154

Isoelectric point  11.65177567

Charge (pH=7)   1.997685954

Topological polar surface area  1025.61

Aromaticity  0

Average rotatable bonds  3.269230769

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  36

X logP energy  -10.47793

Hydropathy 



Literature Information


Title  Identification of the polyamine-induced protein as a periplasmic oligopeptide binding protein.

DOI  NA,

Publication Year  1990

PubMed ID  2187863,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.