SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02949

Signal sequence   MRKLLIFSISAYLMAGIVSCKGVDSATPVTEDRLALNAVN

Length  40

Organism  Elizabethkingia miricola (Chryseobacterium miricola)

UniProt ID  P21163,

Motif  1..40



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02949.cif

Structure  SPKB02949.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4269.05844

Aliphatic index  119.5

Isoelectric point  8.518558471

Charge (pH=7)   0.93723057

Topological polar surface area  1704.96

Aromaticity  0.05

Average rotatable bonds  3.55

Number of hydrogen bond donors  61

Number of hydrogen bond acceptors  60

X logP energy  -16.12586

Hydropathy 



Literature Information


Title  Cloning and expression of peptide-N4-(N-acetyl-beta-D-glucosaminyl)asparagine amidase F in Escherichia coli.

DOI  NA,

Publication Year  1990

PubMed ID  2182635,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.