SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02941

Signal sequence   MREKVVLFLSIIMAIMLPVGNAAA

Length  24

Organism  Corynebacterium pseudotuberculosis

UniProt ID  P20626,

Motif  1..24



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02941.cif

Structure  SPKB02941.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2588.26674

Aliphatic index  150.4166667

Isoelectric point  9.695027686

Charge (pH=7)   0.999461077

Topological polar surface area  912.37

Aromaticity  0.041666667

Average rotatable bonds  3.583333333

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  33

X logP energy  -3.36273

Hydropathy 



Literature Information


Title  Cloning, nucleotide sequence, and expression in Escherichia coli of the phospholipase D gene from Corynebacterium pseudotuberculosis.

DOI  10.1128/jb.172.3.1256-1261.1990,

Publication Year  1990

PubMed ID  2407718,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.